SELECT 
  cscart_ult_product_prices.product_id, 
  MIN(
    IF(
      cscart_ult_product_prices.percentage_discount = 0, 
      cscart_ult_product_prices.price, 
      cscart_ult_product_prices.price - (
        cscart_ult_product_prices.price * cscart_ult_product_prices.percentage_discount
      )/ 100
    )
  ) AS price 
FROM 
  cscart_ult_product_prices 
WHERE 
  cscart_ult_product_prices.product_id IN (
    167, 169, 42, 39, 40, 205, 37, 74, 73, 71, 
    75, 72, 70, 156, 175, 43
  ) 
  AND cscart_ult_product_prices.lower_limit = 1 
  AND cscart_ult_product_prices.company_id = 1 
  AND cscart_ult_product_prices.usergroup_id IN (0, 0, 1) 
GROUP BY 
  cscart_ult_product_prices.product_id

Query time 0.00070

JSON explain

{
  "query_block": {
    "select_id": 1,
    "cost_info": {
      "query_cost": "56.61"
    },
    "grouping_operation": {
      "using_filesort": false,
      "table": {
        "table_name": "cscart_ult_product_prices",
        "access_type": "range",
        "possible_keys": [
          "usergroup",
          "product_id",
          "company_id",
          "lower_limit",
          "usergroup_id"
        ],
        "key": "product_id",
        "used_key_parts": [
          "product_id"
        ],
        "key_length": "3",
        "rows_examined_per_scan": 29,
        "rows_produced_per_join": 4,
        "filtered": "13.92",
        "index_condition": "(`rajansecarter_single_store_19_jan`.`cscart_ult_product_prices`.`product_id` in (167,169,42,39,40,205,37,74,73,71,75,72,70,156,175,43))",
        "cost_info": {
          "read_cost": "55.80",
          "eval_cost": "0.81",
          "prefix_cost": "56.61",
          "data_read_per_join": "129"
        },
        "used_columns": [
          "product_id",
          "price",
          "percentage_discount",
          "lower_limit",
          "company_id",
          "usergroup_id"
        ],
        "attached_condition": "((`rajansecarter_single_store_19_jan`.`cscart_ult_product_prices`.`company_id` = 1) and (`rajansecarter_single_store_19_jan`.`cscart_ult_product_prices`.`lower_limit` = 1) and (`rajansecarter_single_store_19_jan`.`cscart_ult_product_prices`.`usergroup_id` in (0,0,1)))"
      }
    }
  }
}

Result

product_id price
37 159.950000
39 419.000000
40 229.000000
42 79.000000
43 369.000000
70 499.990000
71 529.990000
72 599.990000
73 589.990000
74 524.990000
75 489.990000
167 549.950000
169 749.950000
175 179.990000
205 149.990000